Files in laurentlab-mpipz/rsurvival
Process genotype data from survival experiment
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/analyse.R
R/freq.R
R/fst.R
R/gt.R
R/misc.R
R/permut.R
R/prob.R
R/vcf.R
README.md
codecov.yml
img/plot_iterate_rand.svg
man/AnalyseExpt.Rd
man/AnalyseSplittedExpt.Rd
man/CalcFreqGt.Rd
man/CalcFreqVariant.Rd
man/CalcOddedPick.Rd
man/CalcOddsPredation.Rd
man/CalcProbsSelection.Rd
man/CensorLowDepth.Rd
man/ConvertFileToLogic.Rd
man/CountSignSnps.Rd
man/EstimateFST.Rd
man/ExtractGt.Rd
man/FindIdsAlFreqs.Rd
man/FindIdsGtCounts.Rd
man/IsAtLeastNARatio.Rd
man/IterRandPick.Rd
man/LoadVcf.Rd
man/OmitPoorSamples.Rd
man/OmitPoorVariants.Rd
man/PermutRandSurv.Rd
man/RmIndels.Rd
man/RmNonBiallelics.Rd
man/SliceDfColumns.Rd
man/SliceDfRows.Rd
man/SplitGt.Rd
man/SplitVcf.Rd
man/SplitVect.Rd
rsurvival.Rproj
tests/testthat.R
tests/testthat/res-calcfreqvariant/gt.rds
tests/testthat/res-convertfiletologic/characters
tests/testthat/res-convertfiletologic/empty
tests/testthat/res-convertfiletologic/numbers
tests/testthat/res-convertfiletologic/wrong
tests/testthat/res-extractgt/survivals.rds
tests/testthat/res-extractgt/vcf.rds
tests/testthat/res-loadvcf/lollipop.cinnamon
tests/testthat/res-loadvcf/lollipop.vcf
tests/testthat/res-rmindels/vcf.rds
tests/testthat/res-rmnonbiallelics/vcf.rds
tests/testthat/res-splitgt/gt.rds
tests/testthat/res-splitgt/survivals.rds
tests/testthat/res-splitvcf/surv.txt
tests/testthat/res-splitvcf/survivals.rds
tests/testthat/res-splitvcf/vcf.rds
tests/testthat/test-freq-calcfreqvariant.R
tests/testthat/test-gt-extractgt.R
tests/testthat/test-gt-splitgt.R
tests/testthat/test-misc-convertfiletologic.R
tests/testthat/test-misc-isatleastnaratio.R
tests/testthat/test-misc-slicedfcolumns.R
tests/testthat/test-misc-slicedfrows.R
tests/testthat/test-misc-splitvect.R
tests/testthat/test-vcf-loadvcf.R
tests/testthat/test-vcf-rmindels.R
tests/testthat/test-vcf-rmnonbiallelics.R
tests/testthat/test-vcf-splitvcf.R
