Files in laurentlab-mpipz/rsurvival
Process genotype data from survival experiment

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/analyse.R R/freq.R R/fst.R R/gt.R R/misc.R R/permut.R R/prob.R R/vcf.R README.md
codecov.yml
img/plot_iterate_rand.svg
man/AnalyseExpt.Rd man/AnalyseSplittedExpt.Rd man/CalcFreqGt.Rd man/CalcFreqVariant.Rd man/CalcOddedPick.Rd man/CalcOddsPredation.Rd man/CalcProbsSelection.Rd man/CensorLowDepth.Rd man/ConvertFileToLogic.Rd man/CountSignSnps.Rd man/EstimateFST.Rd man/ExtractGt.Rd man/FindIdsAlFreqs.Rd man/FindIdsGtCounts.Rd man/IsAtLeastNARatio.Rd man/IterRandPick.Rd man/LoadVcf.Rd man/OmitPoorSamples.Rd man/OmitPoorVariants.Rd man/PermutRandSurv.Rd man/RmIndels.Rd man/RmNonBiallelics.Rd man/SliceDfColumns.Rd man/SliceDfRows.Rd man/SplitGt.Rd man/SplitVcf.Rd man/SplitVect.Rd
rsurvival.Rproj
tests/testthat.R
tests/testthat/res-calcfreqvariant/gt.rds
tests/testthat/res-convertfiletologic/characters
tests/testthat/res-convertfiletologic/empty
tests/testthat/res-convertfiletologic/numbers
tests/testthat/res-convertfiletologic/wrong
tests/testthat/res-extractgt/survivals.rds
tests/testthat/res-extractgt/vcf.rds
tests/testthat/res-loadvcf/lollipop.cinnamon
tests/testthat/res-loadvcf/lollipop.vcf
tests/testthat/res-rmindels/vcf.rds
tests/testthat/res-rmnonbiallelics/vcf.rds
tests/testthat/res-splitgt/gt.rds
tests/testthat/res-splitgt/survivals.rds
tests/testthat/res-splitvcf/surv.txt
tests/testthat/res-splitvcf/survivals.rds
tests/testthat/res-splitvcf/vcf.rds
tests/testthat/test-freq-calcfreqvariant.R tests/testthat/test-gt-extractgt.R tests/testthat/test-gt-splitgt.R tests/testthat/test-misc-convertfiletologic.R tests/testthat/test-misc-isatleastnaratio.R tests/testthat/test-misc-slicedfcolumns.R tests/testthat/test-misc-slicedfrows.R tests/testthat/test-misc-splitvect.R tests/testthat/test-vcf-loadvcf.R tests/testthat/test-vcf-rmindels.R tests/testthat/test-vcf-rmnonbiallelics.R tests/testthat/test-vcf-splitvcf.R
laurentlab-mpipz/rsurvival documentation built on Nov. 19, 2018, 10:24 p.m.