CountSignSnps: A function to count snps with a low probability of being due...
In laurentlab-mpipz/rsurvival: Process genotype data from survival experiment
Description
Usage
Arguments
Value
See Also
Examples
Description
A function to count snps with a low probability of being due to a neutral
model
Usage
1
CountSignSnps(probs, max.p.neutral = 0.1)
Arguments
probs
A probability data frame
max.p.neutral
A threshold for p.neutral under which the snp
will be counted (default is 0.01)
Value
An integer. The number of snps with low p.neutral value in
probs data frame.
See Also
For more detail, see AnalyseSplittedExpt or
CalcProbsSelection which can provide you a probs data frame.
Examples
1
2
3
4
5
## Not run:
CountSignSnps(probs)
CountSignSnps(probs, max.p.neutral = 0.05)
## End(Not run)
laurentlab-mpipz/rsurvival documentation built on May 29, 2019, 9:14 a.m.
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Description Usage Arguments Value See Also Examples
Description
A function to count snps with a low probability of being due to a neutral model
Usage
1 | CountSignSnps(probs, max.p.neutral = 0.1)
|
Arguments
probs |
A probability data frame |
max.p.neutral |
A threshold for |
Value
An integer. The number of snps with low p.neutral value in
probs data frame.
See Also
For more detail, see AnalyseSplittedExpt or
CalcProbsSelection which can provide you a probs data frame.
Examples
1 2 3 4 5 | ## Not run:
CountSignSnps(probs)
CountSignSnps(probs, max.p.neutral = 0.05)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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