age_time_structured_population: age_time_structured_population

In laurettemhlanga/PopulationSimulation: Population Simulation

age_time_structured_population

Description

age_time_structured_population

Usage

age_time_structured_population(
  time_slice,
  max_birth_date,
  min_birth_date,
  time_step,
  max_age,
  recency_function,
  birth_rate,
  tau_cutoff,
  BigT = BigT,
  base_mortality_function,
  pmtct_birth_rate,
  incidence_function,
  excess_mortality_function,
  reporting_bin = NA
)

Arguments

time_slice	dates the surveys are to be conducted
max_birth_date	minimum date of birth of the cohorts
min_birth_date	minimum date of birth of the cohorts
time_step	the time step between consecurtive dates or the length of the time between date of births of cohorts
max_age	the maximum age of each cohort
recency_function	the type of function to be used in estimating the probability of testing recently infected
birth_rate	bith rate at the the give date
tau_cutoff	switch parameter that enables cutting off/not the prevelances of rececny calculated beyond big T
BigT	the point to cut off of all points that are beyond recency classification mark
base_mortality_function	base mortality rate ata a given age and time
pmtct_birth_rate	rate of babies/proportion of the population born HIV positive
incidence_function	Incidence rate at a given time
excess_mortality_function	excess mortality rate ata a given age and time
reporting_bin	the size of the reporting bin if NA is specified the calculation defaults to calculations based on the time step

laurettemhlanga/PopulationSimulation documentation built on Sept. 9, 2023, 12:39 p.m.