probability_of_recently_infected: probability_of_recently_infected

In laurettemhlanga/PopulationSimulation: Population Simulation

probability_of_recently_infected

Description

a function that calculates the probability of testing recently infected at a time since infection tau.

Usage

probability_of_recently_infected(
  time_in_years,
  recency_type = "weibull",
  q = 0.0167,
  shape = 5,
  gradient = -0.5,
  intercept = 0.5,
  scale = 0.545,
  big_tyears = 2,
  value = 1
)

Arguments

time_in_years	a vector of times since infection.
recency_type	a vector of times since infection.
q	a vector of times since infection.
shape	as defined by the weibull shape parameter, determines/affects the shape of a distribution
gradient	default value which is zero and is interpretated as .
intercept	as defined by the weibull scale parameter, determines the scale and determines how spread out the distribution is
scale	as defined by the weibull scale parameter, determines the scale and determines how spread out the distribution is
big_tyears	a vector of times since infection.
value	as defined by the weibull shape parameter, determines/affects the shape of a distribution

Value

a vector which denotes being the probability of testing recently infected being recently infected fo

laurettemhlanga/PopulationSimulation documentation built on Sept. 9, 2023, 12:39 p.m.