mseXSA: mseXSA

In laurieKell/mydas-pkg: Tools for conducting Management Strategy Evaluation for data limited stocks

Description

MSE with XSA as the stock assessment in the management procedure

Usage

mseXSA(om, eq, mp, control, rf = "missing", ftar = 1, fmin = 0.05,
  bpa = 0.5, sigma = 0.3, bndTac = c(0.01, 100), interval = 3,
  start = range(om)["maxyear"] - 30, end = range(om)["maxyear"] -
  interval, sr_deviances = rlnoise(dim(om)[6], FLQuant(0, dimnames =
  list(year = start:(end + interval))), 0.3),
  u_deviances = rlnoise(dim(mp)[6], FLQuant(0, dimnames =
  dimnames(iter(stock.n(om), 1))), 0.2), maxF = 1)

Arguments

om	FLStock object as the operating model
eq	FLBRP blah,blah,blah,...
mp	FLStock blah,blah,blah,...
control	FLXSA.control blah,blah,blah,...
rf	blah,blah,blah,...
ftar	numeric default is 1.0
fmin	numeric default is 0.05 HCR
bpa	numeric default is 0.5 HCR
sigma	numeric default is 0.3 HCR
bndTac	numeric default is c(0.01,100) Bounds on TAC changes
interval	numeric default is 3 years over which to run MSE, doesnt work if interval==1, this is a bug
start	numeric default is range(om)["maxyear"]-30
end	numeric default is range(om)["maxyear"]-interval
sr_deviances	FLQuant Stochasticity, either by default or supplied as args rlnoise(dim(om)[6],FLQuant(0,dimnames=list(year=start:(end+interval))),0.3),
u_deviances	FLQuant rlnoise(dim(mp)[6],FLQuant(0,dimnames=dimnames(iter(stock.n(om),1))),0.2),
maxF	numeric 1.0 Capacity, i.e. F in OM can not be greater than this

Author(s)

Laurence Kell, Sea++

Examples

## Not run: 
data(pl4)

## End(Not run)

laurieKell/mydas-pkg documentation built on Nov. 8, 2019, 10:58 p.m.