comparePCS-massFlowAnno-method: Compare selected pseudo chemical spectra.

Description Usage Arguments Value

Description

Method looks into selected pseudo chemical spectra and returns multiple plots: (1) spectra in the most intense samples; (2) retention time differences; (3) intensity drift during acquisition time. If out_dir is provided, generated plots are written as png files. Otherwise, plots are plotted on current graphical device. massFlowAnno class object must be annotated using annotateDS method first.

Usage

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## S4 method for signature 'massFlowAnno'
comparePCS(object, pcs = NULL, out_dir = NULL)

Arguments

object

massFlowAnno class object.

pcs

numeric specifying two or more pseudo chemical spectra to look at.

out_dir

character specifying desired directory for generated figure. Default set to NULL and figure is plotted to graphical device.

Value

Method returns three plots comparing selected pseudo chemical spectra.


lauzikaite/massFlowR documentation built on April 29, 2020, 9:45 a.m.