Files in lbusett/phenoriceR
Routines for analysis of PhenoRice outputs

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md Other_rmds/procssing_iran.Rmd Other_rmds/procssing_iran.pdf R/pr_create_ordered_tiffs.R R/pr_create_vrt_mosaics.R R/pr_decirc_doys.R R/pr_extract.R R/pr_extract_idl_outs.R R/pr_extract_subarea.R R/pr_mutate_when.R R/pr_read_riceatlas.R R/pr_rename_year_mosaics.R R/pr_reshape_outs.R README.Rmd README.md WIP/ALL/LB_Phenorice_plot_all.R WIP/ALL/LB_Phenorice_plot_all_areas.R WIP/ALL/LB_Phenorice_plot_all_final.R WIP/ALL/LB_Phenorice_plot_pheno_results_final.R WIP/ERMES/2k_Aggregation/LB_Aggregate_PhenoRice_2016.R WIP/ERMES/2k_Aggregation/LB_Plot_Aggregate_pheno_and_raster_out.R WIP/ERMES/2k_Aggregation/LB_Plot_Aggregate_pheno_and_raster_out.Rmd WIP/ERMES/2k_Aggregation/LB_Plot_Aggregate_pheno_and_raster_out.pdf WIP/ERMES/2k_Aggregation/LB_Plot_Phenology_Results_JRC.R WIP/ERMES/2k_Aggregation/LB_Plot_Phenology_Results_JRC_fiveyears.R WIP/ERMES/2k_Aggregation/knitr_launcher_pheno_aggregate.R WIP/ERMES/Old/LB_Plot_Aggregate_pheno_and_raster_out.R WIP/ERMES/Old/LB_Plot_Aggregate_pheno_and_raster_out.Rmd WIP/ERMES/Old/LB_Plot_Aggregate_pheno_and_raster_out.pdf WIP/ERMES/Validation/2016/ERMES_Validataion_16.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_250_es_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_250_ew_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_250_gr_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_250_it_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_2k_es_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_2k_gr_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_2k_it_2016.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_es_16.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_gr_16.R WIP/ERMES/Validation/2016/LB_Compare_Sow_w_field_it_16.R WIP/ERMES/Validation/ERMES_Validataion_15.R WIP/ERMES/Validation/LB_Compare_Sow_w_field.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_250_es.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_250_gr.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_250_it.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_2k_es.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_2k_gr.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_2k_it.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_ES.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_GR.R WIP/ERMES/Validation/LB_Compare_Sow_w_field_Luigi.R WIP/ERMES/Validation/LB_Compare_Sow_w_sar_es_new.R WIP/ERMES/Validation/LB_Compare_Sow_w_sar_gr_new.R WIP/ERMES/Validation/LB_Compare_Sow_w_sar_it.R WIP/ERMES/Validation/LB_Compare_Sow_w_sar_it_new.R WIP/ERMES/Validation/LB_Myzonal.R WIP/OLD/LB_Aggregate_PhenoRice_V22.R WIP/OLD/LB_Phenorice_Aggregate.R WIP/OLD/LB_Phenorice_Aggregate_SEN.R WIP/OLD/LB_Phenorice_PostProcess_Aggregate.R WIP/OLD/LB_Phenorice_PostProcess_Aggregate_new.R WIP/OLD/LB_Phenorice_PostProcess_Plot.R WIP/OLD/LB_Phenorice_Report_SEN.Rmd WIP/OLD/LB_Phenorice_Report_Validate_PHL_WS.Rmd WIP/OLD/LB_Phenorice_Validate.R WIP/OLD/LB_Phenorice_checkSeasons.R WIP/OLD/LB_Phenorice_plot_dates.R WIP/OLD/LB_Phenorice_plot_dates_PHL.R WIP/OLD/LB_Phenorice_plot_dates_Sen.R WIP/OLD/LB_Phenorice_plot_validate.R WIP/OLD/LR_Phenorice_Stats.R WIP/OLD/LR_Phenorice_Stats_SEN.R WIP/OLD/PhenoRice_adm_stats.R WIP/OLD/Phenorice_GUI.R WIP/OLD/Phenorice_SEN_Area_Analysis.R WIP/OLD/knitr_launcher_pheno_aggregate.R WIP/Old_and_various/LB_Build_Grid.R WIP/Old_and_various/LB_Check_Signals_phenorice.R WIP/Old_and_various/PhenoRice_Analyses_PHL.R WIP/Old_and_various/Phenorice_Statistics_Simple.R WIP/Phenorice_GUI.R WIP/aaa.R WIP/aaaaa.R WIP/extraction.R WIP/fullproc1.R WIP/iranplots.R WIP/processing_scripts/compress_pr_outs.R WIP/subset_ordered.R WIP/wip_grapjhs2.R WIP/wipgraphs.R cran-comments.md
docs/LICENSE.html
docs/articles/Data_extraction.Rmd
docs/articles/Data_extraction.html
docs/articles/Data_extraction_files/figure-html/unnamed-chunk-1-1.png
docs/articles/Data_extraction_files/figure-html/unnamed-chunk-2-1.png
docs/articles/Data_extraction_files/figure-html/unnamed-chunk-2-2.png
docs/articles/Data_extraction_files/figure-html/unnamed-chunk-2-3.png
docs/articles/Data_extraction_simplified.html
docs/articles/Data_extraction_simplified_files/figure-html/unnamed-chunk-5-1.png
docs/articles/Data_extraction_simplified_files/figure-html/unnamed-chunk-7-1.png
docs/articles/RiceAtlas_Comparison.Rmd
docs/articles/RiceAtlas_Comparison.html
docs/articles/RiceAtlas_Comparison_files/figure-html/unnamed-chunk-1-1.png
docs/articles/RiceAtlas_Comparison_files/figure-html/unnamed-chunk-2-1.png
docs/articles/RiceAtlas_Comparison_files/figure-html/unnamed-chunk-3-1.png
docs/articles/RiceAtlas_Comparison_files/figure-html/unnamed-chunk-5-1.png
docs/articles/RiceAtlas_Reshuffling.Rmd
docs/articles/RiceAtlas_Reshuffling.html
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-11-1.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-13-1.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-13-2.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-5-1.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-5-2.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-5-3.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-6-1.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-6-2.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-8-1.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-8-2.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-8-3.png
docs/articles/RiceAtlas_Reshuffling_files/figure-html/unnamed-chunk-9-1.png
docs/articles/RiceAtlas_Work.Rmd
docs/articles/RiceAtlas_Work.html
docs/articles/index.html
docs/articles/processing_summary.Rmd
docs/articles/processing_summary.html
docs/articles/processing_summary_files/figure-html/unnamed-chunk-10-1.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-4-1.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-4-2.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-4-3.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-7-1.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-8-1.png
docs/articles/processing_summary_files/figure-html/unnamed-chunk-9-1.png
docs/articles/procssing_iran.Rmd
docs/authors.html
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/reference/create_ordered_tiffs.html
docs/reference/create_vrt_mosaics.html
docs/reference/decirc_phenorice.html
docs/reference/extract_subarea.html
docs/reference/hello.html
docs/reference/index.html
docs/reference/mutate_when.html
docs/reference/phenorice_GUI.html
docs/reference/pr_create_ordered_tiffs.html
docs/reference/pr_create_vrt_mosaics.html
docs/reference/pr_extract-1.png
docs/reference/pr_extract.html
docs/reference/pr_extract_idl_outs.html
docs/reference/pr_extract_subarea.html
docs/reference/pr_mutate_when.html
docs/reference/pr_read_riceatlas.html
docs/reference/pr_rename_year_mosaics.html
docs/reference/pr_reshape_outs.html
docs/reference/read_riceatlas.html
docs/reference/rename_year_mosaics.html
docs/reference/reshape_outs.html
inst/ExtData/NormalizedDB.txt
man/decirc_phenorice.Rd man/pr_create_ordered_tiffs.Rd man/pr_create_vrt_mosaics.Rd man/pr_extract.Rd man/pr_extract_idl_outs.Rd man/pr_extract_subarea.Rd man/pr_mutate_when.Rd man/pr_read_riceatlas.Rd man/pr_rename_year_mosaics.Rd man/pr_reshape_outs.Rd
phenoriceR.Rproj
tests/testthat.R vignettes/Data_extraction.Rmd vignettes/Data_extraction_simplified.Rmd vignettes/RiceAtlas_Comparison.Rmd vignettes/RiceAtlas_Reshuffling.Rmd vignettes/RiceAtlas_Work.Rmd vignettes/processing_summary.Rmd
lbusett/phenoriceR documentation built on May 18, 2019, 9:17 p.m.