Description Usage Arguments Author(s)
M-part of BEEM, estimate biomass with inferred model parameters
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dat.tss |
relative abundance matrix (each OTU in one row) |
a |
estimated growth rate values (scaled by self-interaction) |
b |
estimated interaction matrix (scaled by self-interaction) |
c |
estimated external perturbation effect matrix (scaled by self-interaction) |
perturbation.presence |
estimated external perturbation presence (not to be multiplied by 1/m) (each perturbation in one row, each sample in one column) |
ncpu |
number of CPUs (default: 4) |
Chenhao Li, Gerald Tan, Niranjan Nagarajan
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