Files in lcolladotor/derfinderSimData

Simulated data for illustrating derfinder's functions

.gitignore

DESCRIPTION

NAMESPACE

R/derfinderData-package.r README.md extdata/simReads.Rmd

extdata/simReads.bib

extdata/simReads.html

extdata/simulatedFasta/paired.txt

extdata/simulatedFasta/sample_01_1.fasta.gz

extdata/simulatedFasta/sample_01_2.fasta.gz

extdata/simulatedFasta/sample_02_1.fasta.gz

extdata/simulatedFasta/sample_02_2.fasta.gz

extdata/simulatedFasta/sample_03_1.fasta.gz

extdata/simulatedFasta/sample_03_2.fasta.gz

extdata/simulatedFasta/sample_04_1.fasta.gz

extdata/simulatedFasta/sample_04_2.fasta.gz

extdata/simulatedFasta/sample_05_1.fasta.gz

extdata/simulatedFasta/sample_05_2.fasta.gz

extdata/simulatedFasta/sample_06_1.fasta.gz

extdata/simulatedFasta/sample_06_2.fasta.gz

extdata/simulatedFasta/sample_07_1.fasta.gz

extdata/simulatedFasta/sample_07_2.fasta.gz

extdata/simulatedFasta/sample_08_1.fasta.gz

extdata/simulatedFasta/sample_08_2.fasta.gz

extdata/simulatedFasta/sample_09_1.fasta.gz

extdata/simulatedFasta/sample_09_2.fasta.gz

extdata/simulatedFasta/sample_10_1.fasta.gz

extdata/simulatedFasta/sample_10_2.fasta.gz

extdata/simulatedFasta/sample_11_1.fasta.gz

extdata/simulatedFasta/sample_11_2.fasta.gz

extdata/simulatedFasta/sample_12_1.fasta.gz

extdata/simulatedFasta/sample_12_2.fasta.gz

extdata/simulatedFasta/sample_13_1.fasta.gz

extdata/simulatedFasta/sample_13_2.fasta.gz

extdata/simulatedFasta/sample_14_1.fasta.gz

extdata/simulatedFasta/sample_14_2.fasta.gz

extdata/simulatedFasta/sample_15_1.fasta.gz

extdata/simulatedFasta/sample_15_2.fasta.gz

extdata/simulatedFasta/sample_16_1.fasta.gz

extdata/simulatedFasta/sample_16_2.fasta.gz

extdata/simulatedFasta/sample_17_1.fasta.gz

extdata/simulatedFasta/sample_17_2.fasta.gz

extdata/simulatedFasta/sample_18_1.fasta.gz

extdata/simulatedFasta/sample_18_2.fasta.gz

extdata/simulatedFasta/sample_19_1.fasta.gz

extdata/simulatedFasta/sample_19_2.fasta.gz

extdata/simulatedFasta/sample_20_1.fasta.gz

extdata/simulatedFasta/sample_20_2.fasta.gz

extdata/simulatedFasta/trueFoldChange.txt

extdata/thout/.gitignore

extdata/thout/makeBai.sh

extdata/thout/run-paired-tophat.sh

extdata/thout/sample1/accepted_hits.bam

extdata/thout/sample1/accepted_hits.bam.bai

extdata/thout/sample1/align_summary.txt

extdata/thout/sample1/sample1.th.e1950483

extdata/thout/sample1/sample1.th.o1950483

extdata/thout/sample10/accepted_hits.bam

extdata/thout/sample10/accepted_hits.bam.bai

extdata/thout/sample10/align_summary.txt

extdata/thout/sample10/sample10.th.e1950492

extdata/thout/sample10/sample10.th.o1950492

extdata/thout/sample11/accepted_hits.bam

extdata/thout/sample11/accepted_hits.bam.bai

extdata/thout/sample11/align_summary.txt

extdata/thout/sample11/sample11.th.e1950493

extdata/thout/sample11/sample11.th.o1950493

extdata/thout/sample12/accepted_hits.bam

extdata/thout/sample12/accepted_hits.bam.bai

extdata/thout/sample12/align_summary.txt

extdata/thout/sample12/sample12.th.e1950494

extdata/thout/sample12/sample12.th.o1950494

extdata/thout/sample13/accepted_hits.bam

extdata/thout/sample13/accepted_hits.bam.bai

extdata/thout/sample13/align_summary.txt

extdata/thout/sample13/sample13.th.e1950495

extdata/thout/sample13/sample13.th.o1950495

extdata/thout/sample14/accepted_hits.bam

extdata/thout/sample14/accepted_hits.bam.bai

extdata/thout/sample14/align_summary.txt

extdata/thout/sample14/sample14.th.e1950496

extdata/thout/sample14/sample14.th.o1950496

extdata/thout/sample15/accepted_hits.bam

extdata/thout/sample15/accepted_hits.bam.bai

extdata/thout/sample15/align_summary.txt

extdata/thout/sample15/sample15.th.e1950497

extdata/thout/sample15/sample15.th.o1950497

extdata/thout/sample16/accepted_hits.bam

extdata/thout/sample16/accepted_hits.bam.bai

extdata/thout/sample16/align_summary.txt

extdata/thout/sample16/sample16.th.e1950498

extdata/thout/sample16/sample16.th.o1950498

extdata/thout/sample17/accepted_hits.bam

extdata/thout/sample17/accepted_hits.bam.bai

extdata/thout/sample17/align_summary.txt

extdata/thout/sample17/sample17.th.e1950499

extdata/thout/sample17/sample17.th.o1950499

extdata/thout/sample18/accepted_hits.bam

extdata/thout/sample18/accepted_hits.bam.bai

extdata/thout/sample18/align_summary.txt

extdata/thout/sample18/sample18.th.e1950500

extdata/thout/sample18/sample18.th.o1950500

extdata/thout/sample19/accepted_hits.bam

extdata/thout/sample19/accepted_hits.bam.bai

extdata/thout/sample19/align_summary.txt

extdata/thout/sample19/sample19.th.e1950501

extdata/thout/sample19/sample19.th.o1950501

extdata/thout/sample2/accepted_hits.bam

extdata/thout/sample2/accepted_hits.bam.bai

extdata/thout/sample2/align_summary.txt

extdata/thout/sample2/sample2.th.e1950484

extdata/thout/sample2/sample2.th.o1950484

extdata/thout/sample20/accepted_hits.bam

extdata/thout/sample20/accepted_hits.bam.bai

extdata/thout/sample20/align_summary.txt

extdata/thout/sample20/sample20.th.e1950502

extdata/thout/sample20/sample20.th.o1950502

extdata/thout/sample3/accepted_hits.bam

extdata/thout/sample3/accepted_hits.bam.bai

extdata/thout/sample3/align_summary.txt

extdata/thout/sample3/sample3.th.e1950485

extdata/thout/sample3/sample3.th.o1950485

extdata/thout/sample4/accepted_hits.bam

extdata/thout/sample4/accepted_hits.bam.bai

extdata/thout/sample4/align_summary.txt

extdata/thout/sample4/sample4.th.e1950486

extdata/thout/sample4/sample4.th.o1950486

extdata/thout/sample5/accepted_hits.bam

extdata/thout/sample5/accepted_hits.bam.bai

extdata/thout/sample5/align_summary.txt

extdata/thout/sample5/sample5.th.e1950487

extdata/thout/sample5/sample5.th.o1950487

extdata/thout/sample6/accepted_hits.bam

extdata/thout/sample6/accepted_hits.bam.bai

extdata/thout/sample6/align_summary.txt

extdata/thout/sample6/sample6.th.e1950488

extdata/thout/sample6/sample6.th.o1950488

extdata/thout/sample7/accepted_hits.bam

extdata/thout/sample7/accepted_hits.bam.bai

extdata/thout/sample7/align_summary.txt

extdata/thout/sample7/sample7.th.e1950489

extdata/thout/sample7/sample7.th.o1950489

extdata/thout/sample8/accepted_hits.bam

extdata/thout/sample8/accepted_hits.bam.bai

extdata/thout/sample8/align_summary.txt

extdata/thout/sample8/sample8.th.e1950490

extdata/thout/sample8/sample8.th.o1950490

extdata/thout/sample9/accepted_hits.bam

extdata/thout/sample9/accepted_hits.bam.bai

extdata/thout/sample9/align_summary.txt

extdata/thout/sample9/sample9.th.e1950491

extdata/thout/sample9/sample9.th.o1950491

man/derfinderData-package.Rd

lcolladotor/derfinderSimData documentation built on May 21, 2017, 10:32 a.m.