R/derfinderData-package.r

In lcolladotor/derfinderSimData: Simulated data for illustrating derfinder's functions

#' Simulated data for illustrating derfinder's functions
#'
#' Reads were generated for chromosome 22 hg19 transcripts with the goal of illustrating how to use derfinder. The design is a two group comparison with 10 samples per group with 20% differentially expressed transcripts (10% higher in each group). The package provides the fasta files as well as the resulting BAM files from aligning the reads with TopHat v2.0.9.
#'
#' @name derfinderData-package
#' @aliases derfinderData-package
#' @docType package
#' @author Leonardo Collado-Torres <lcollado@@jhsph.edu>
#' @references 
#'
#' Leonardo Collado-Torres, Alyssa Frazee, Andrew Jaffe and Jeffrey Leek (2013). derfinder: Fast differential expression analysis of RNA-seq data at base-pair resolution. https://github.com/lcolladotor/derfinder
#'
#' @keywords package
NULL