add.chain: Adding chain to custom traceplot

In lcomm/ltools: Helper Functions

Description

Function to add a trace line for a single chain of an MCMC to an existing custom traceplot created by my.traceplot.

Usage

add.chain(trace.vec, thin = 0, col = "black")

Arguments

trace.vec	Vector containing draws from the MCMC sampler
thin	Amount of thinning applied to the plot. For example, if thin=3, then every third sample point will be plotted. The total number of iterations should be divisible by the thinning amount.
col	Color of trace line. Defaults to black.

See Also

my.traceplot

Examples

## Draw a traceplot and add chains for a random sample
my.samples = rnorm(10000, 5, 10)
my.samples2 = rnorm(10000, 5, 20)
my.traceplot(my.samples,label="Some title",thin=5,burn=1000,col="blue")
add.chain(my.samples2,thin=5,col="green")

lcomm/ltools documentation built on May 20, 2019, 11:28 p.m.