View source: R/filter_features.R
Filter a matrix with counts
1 2 | filter_features(x, method = c("counts", "cpm"), min_value, thres_samp,
groups = NULL, at_least_one = TRUE)
|
method |
Method used for the filter: counts or cpm |
min_value |
minimum value of counts or cpm |
thres_samp |
minimum number of samples with min_value counts |
at_least_one |
if at least one treatment meet the requirements, the feature is not removed if treatment is passed. If FALSE, all the treatmens must meet this requirement |
treatment |
factor with treatment for each sample. If this parameter is passed, the filter condition is verified for each treatment (and not overall) |
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