get_deseq2_results: Returns DESeq2 results in long format
In lefeverde/basicOmics: Package for basic statistical tests on Omics data
Description
Usage
Arguments
Value
Description
Returns DESeq2 results in long format
Usage
1
get_deseq2_results(dds_object, gene_annots = NULL, use_shrinkage = FALSE)
Arguments
dds_object
DDS object after running DESeq
gene_annots
Gene annotations which if not given are assumed
use_shrinkage
logical whether to perform lfcshrinkage
Value
data.frame of results in long(ish) format
lefeverde/basicOmics documentation built on Feb. 28, 2021, 11:03 p.m.
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Description Usage Arguments Value
Description
Returns DESeq2 results in long format
Usage
1 | get_deseq2_results(dds_object, gene_annots = NULL, use_shrinkage = FALSE)
|
Arguments
dds_object |
DDS object after running DESeq |
gene_annots |
Gene annotations which if not given are assumed |
use_shrinkage |
logical whether to perform lfcshrinkage |
Value
data.frame of results in long(ish) format
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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