enrich_wrapper: Over Representation analysis (ORA)
In lefeverde/basicOmics: Package for basic statistical tests on Omics data
Description
Usage
Arguments
Value
View source: R/enrichment_wrappers.R
Description
ORA wrapper which splits the long res list into
combined, up-regulated, and down-regulated list of
genes. It then performs ORA using clusterProfiler
Usage
1
enrich_wrapper(res_object, lfc_thresh = 0)
Arguments
res_object
res object in long(ish) format
lfc_thresh
lfc threshold absolute value
Value
data.frame of enriched pathways
lefeverde/basicOmics documentation built on Feb. 28, 2021, 11:03 p.m.
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Description Usage Arguments Value
View source: R/enrichment_wrappers.R
Description
ORA wrapper which splits the long res list into combined, up-regulated, and down-regulated list of genes. It then performs ORA using clusterProfiler
Usage
1 | enrich_wrapper(res_object, lfc_thresh = 0)
|
Arguments
res_object |
res object in long(ish) format |
lfc_thresh |
lfc threshold absolute value |
Value
data.frame of enriched pathways
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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