Description Usage Arguments Examples
View source: R/nsignif.DEswan.R
Calculate number of significant variables for a set of pvalues thresholds
1 | nsignif.DEswan(res.DEswan.wide, thresholds)
|
res.DEswan.wide: |
a data Frame - pvalues or qvalues from DEswan in a wide format |
thresholds: |
a Vector - p or q-values thresholds. Default is c(0.05,1e-2,1e-3,1e-4,1e-5) |
1 2 3 4 5 6 7 8 | res.DEswan=DEswan(data.df = agingplasmaproteome[,-c(1:3)],
qt = agingplasmaproteome[,1],
window.center = seq(40,100,10),
buckets.size = 10,
covariates = agingplasmaproteome[,c(2:3)])
res.DEswan.wide.p=reshape.DEswan(res.DEswan,parameter = 1,factor = "qt")
res.DEswan.wide.p.signif=nsignif.DEswan(res.DEswan.wide.p)
head(res.DEswan.wide.p.signif)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.