Man pages for lehner-lab/dimsumms
Analysis scripts to reproduce the figures and results from DiMSum manuscript
| dimsumms | dimsumms |
| dimsumms_aa_properties_mutant_effects | dimsumms_aa_properties_mutant_effects |
| dimsumms__aa_properties_pca | dimsumms__aa_properties_pca |
| dimsumms__aa_properties_pca_doubles_loadings | dimsumms__aa_properties_pca_doubles_loadings |
| dimsumms__aa_properties_pca_singles_loadings | dimsumms__aa_properties_pca_singles_loadings |
| dimsumms_bottleneck_fitness_scatter | dimsumms_bottleneck_fitness_scatter |
| dimsumms_bottleneck_fitness_vs_hydrophobicity_scatter | dimsumms_bottleneck_fitness_vs_hydrophobicity_scatter |
| dimsumms_bottleneck_simulations | dimsumms_bottleneck_simulations |
| dimsumms__create_dir | dimsumms__create_dir |
| dimsumms__dna_extraction_bottleneck | dimsumms__dna_extraction_bottleneck |
| dimsumms_errormodel_data_manipulations | dimsumms_errormodel_data_manipulations |
| dimsumms_errormodel_fit | dimsumms_errormodel_fit |
| dimsumms_errormodel_leaveoneout | dimsumms_errormodel_leaveoneout |
| dimsumms_errormodel_leaveoneout_preprocess_datasets | dimsumms_errormodel_leaveoneout_preprocess_datasets |
| dimsumms_errormodel_random_effect | dimsumms_errormodel_random_effect |
| dimsumms__format_dir | dimsumms__format_dir |
| dimsumms__gg_color_hue | dimsumms__gg_color_hue |
| dimsumms__ggpairs_binhex | dimsumms__ggpairs_binhex |
| dimsumms_hierarchical_abundance | dimsumms_hierarchical_abundance |
| dimsumms__library_bottleneck | dimsumms__library_bottleneck |
| dimsumms__load_toxicity | dimsumms__load_toxicity |
| dimsumms__plot_loadings | dimsumms__plot_loadings |
| dimsumms_prepare_all_dms_dt | dimsumms_prepare_all_dms_dt |
| dimsumms_prepare_dms_dt | dimsumms_prepare_dms_dt |
| dimsumms_real_bottleneck_scatterplot_matrices | dimsumms_real_bottleneck_scatterplot_matrices |
| dimsumms__replicate_bottleneck | dimsumms__replicate_bottleneck |
