dimsumms_bottleneck_fitness_vs_hydrophobicity_scatter: dimsumms_bottleneck_fitness_vs_hydrophobicity_scatter

In lehner-lab/dimsumms: Analysis scripts to reproduce the figures and results from DiMSum manuscript

Description

Plot fitness before/after bottleneck and different minimum input count thresholds

Usage

dimsumms_bottleneck_fitness_vs_hydrophobicity_scatter(fitness_list,
  outpath, aaprop_file, aaprop_file_selected, colour_scheme,
  execute = TRUE)

Arguments

fitness_list	list of data.tables (required)
outpath	output path for plots and saved objects (required)
aaprop_file	path to amino acid properties file (required)
aaprop_file_selected	path to file with selected subset of identifiers
colour_scheme	colour scheme file (required)
execute	whether or not to execute the analysis (default: TRUE)

Value

Nothing

lehner-lab/dimsumms documentation built on June 23, 2020, 5:48 p.m.