cepair: extract lncRNA-circRNA ceRNA pair

In leiming8886/fRNC: ncRNA module search functions

extract lncRNA-circRNA ceRNA pair

Description

extract lncRNA-circRNA ceRNA pair

Usage

cepair(interac, N_mi = 50)

Arguments

interac	the interaction data matrix, in which the column name contain "node_gene_ID", "type" and "target_gene_ID"
N_mi	a numeric value, shared miRNAs by a lncRNA and circRNA

Value

interac_temp the interaction data matrix, in which the column name contain "node_gene_ID", "type" and "target_gene_ID"

Examples

## Not run: 
interac <- interStringency(type = "ncRNA", stringency = "strict")
interac_strict_p_50 <- cepair(interac, N_mi= 50)

## End(Not run)

leiming8886/fRNC documentation built on Feb. 21, 2023, 4:12 p.m.