savelocalM: save and plot module with local method
In leiming8886/fRNC: ncRNA module search functions

savelocalM

R Documentation

save and plot module with local method

Description

save and plot module for the method local result in the function runmodule

Usage

savelocalM(res.list_local)

Arguments

res.list_local

the methd local result

Value

the plot and the format XGMML of the each module, filenames is the seed node

Examples

## Not run: 
data("dataN")
gene2weight <- combinp(dataN[,c("type","logFC","PValue")])
interac <- interStringency(type = "transcription", spec ="hg",
				stringency = "strict")
interac <- interac[,c("node_gene_ID","type","target_gene_ID")]
res.list_local <- runmodule(network = interac, gene2weight,
 method = "local",maxsize=15, seletN = "MIMAT0000461")
savelocalM(res.list_local)

## End(Not run)

leiming8886/fRNC documentation built on Feb. 21, 2023, 4:12 p.m.