Man pages for liangyy/silver-standard-performance
Generating PR/ROC curves in light and flexible way
| compute_auc | Calculate AUC for ROC |
| compute_power_and_fdr | Calculate power and FDR |
| compute_tpr_and_fpr | Calculate TPR and FPR |
| gene_annotation_gencode_v26_hg38 | Gene annotation (position and gene name etc) |
| gen_fdr_power_curve | Generate precision-recall curve |
| gen_roc_curve | Generate receiver operating characteristic curve |
| greedy_map | Greedy mapping |
| is_sig | Check if the candidates should be proposed |
| ld_block_pickrell_eur_b38 | LD block annotation (for European population, in hg38) |
| omim_based_silver_standard | Silver standard based on OMIM <-> HPO/pheocode mapping |
| orphanet_based_silver_standard | Silver standard based on Orphanet <-> HPO/pheocode mapping |
| rare_variant_based_silver_standard | Silver standard based on rare variant association |
| silver_standard_perf | Plotting PR/ROC curves |
