get_overview_df: Overview of posterior modes, means, medians for all pHLA...

Description Usage Arguments

View source: R/immunogen_decision_rules.r

Description

Returns a dataframe with the marginal posterior mode, mean and median of the pHLA immunogenicity, for each HLA. Mode, mean and median are all on a separate line, so each pHLA combination occurs three times Also gives the KL divergence of the marginal posterior with respect to the uniform distribution

Usage

1
get_overview_df(peps_for_analysis, chainDir, molecs)

Arguments

peps_for_analysis

Which peptides do you want to include

chainDir

directory that contains the MH chains

molecs

A vector listing the molecules that are present in the ELISpot subjects


liesb/BIITE documentation built on May 21, 2017, 1:35 p.m.