View source: R/immunogen_mh_tools_2.r
Performs one time step in the MH chain:
1 | one_time_step(h, loglik_h, eli.dat, pep, mol.names, unif.prop, radius, p.df)
|
h |
Hypothesis which is the current state of the chain |
loglik_h |
Log likelihood of h |
eli.dat |
ELISpot dataset |
pep |
Peptide currently being processed |
mol.names |
Names of the HLA molecules in the ELISpot dataset |
unif.prop |
If TRUE, choose proposal state from [0,1]^m |
radius |
If unif.prop is FALSE, we look for a proposal state in a hypercube around h restricted by radius |
p.df |
Dataframe which describes the parameters of the prior distributions for each HLA |
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