Database: Database

In lifs-tools/rmzTab-m: R Package Client for mzTab-M Reference Implementation and Validation API

Database

Description

Database Class

Format

An R6Class generator object

Public fields

id

integer [optional]

param

Parameter

prefix

character

version

character

uri

character

Methods

Public methods

• Database$new()

• Database$toJSON()

• Database$fromJSON()

• Database$toJSONString()

• Database$fromJSONString()

• Database$toDataFrame()

• Database$fromDataFrame()

• Database$clone()

---

Method new()

Create a Database

Usage

Database$new(param, prefix, version, uri, id = NULL, ...)

Arguments

param

Parameter defining the database Parameter.

prefix

Database prefix.

version

Database version.

uri

External database URI.

id

Database id.

...

local optional variable arguments

---

Method toJSON()

Serialize to list object suitable for jsonlite

Usage

Database$toJSON()

---

Method fromJSON()

Deserialize from jsonlite list object

Usage

Database$fromJSON(DatabaseJson)

Arguments

DatabaseJson

list object.

---

Method toJSONString()

Serialize to JSON string.

Usage

Database$toJSONString()

---

Method fromJSONString()

Deserialize from JSON string

Usage

Database$fromJSONString(DatabaseJson)

Arguments

DatabaseJson

JSON string

---

Method toDataFrame()

Serialize to data frame

Usage

Database$toDataFrame()

---

Method fromDataFrame()

Deserialize from database data frame

Usage

Database$fromDataFrame(DatabaseDataFrame)

Arguments

DatabaseDataFrame

database data frame

---

Method clone()

The objects of this class are cloneable with this method.

Usage

Database$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

lifs-tools/rmzTab-m documentation built on Jan. 26, 2023, 4:45 p.m.