SpectraRef: SpectraRef

In lifs-tools/rmzTab-m: R Package Client for mzTab-M Reference Implementation and Validation API

SpectraRef

Description

SpectraRef Class

Format

An R6Class generator object

Public fields

ms_run

MsRun

reference

character

Methods

Public methods

• SpectraRef$new()

• SpectraRef$toJSON()

• SpectraRef$fromJSON()

• SpectraRef$toJSONString()

• SpectraRef$fromJSONString()

• SpectraRef$toString()

• SpectraRef$fromString()

• SpectraRef$clone()

---

Method new()

Create a SpectraRef

Usage

SpectraRef$new(ms_run, reference, ...)

Arguments

ms_run

The ms run MsRun .

reference

The reference to a particular spectrum using the id_format defined in MsRun.

...

local optional variable arguments

---

Method toJSON()

Serialize to list object suitable for jsonlite

Usage

SpectraRef$toJSON()

---

Method fromJSON()

Deserialize from jsonlite list object

Usage

SpectraRef$fromJSON(SpectraRefJson)

Arguments

SpectraRefJson

list object.

---

Method toJSONString()

Serialize to JSON string.

Usage

SpectraRef$toJSONString()

---

Method fromJSONString()

Deserialize from JSON string

Usage

SpectraRef$fromJSONString(SpectraRefJson)

Arguments

SpectraRefJson

JSON string

---

Method toString()

Serialize to string

Usage

SpectraRef$toString()

---

Method fromString()

Deerialize from string

Usage

SpectraRef$fromString(SpectraRefString)

Arguments

SpectraRefString

The SpectraRef string representation.

---

Method clone()

The objects of this class are cloneable with this method.

Usage

SpectraRef$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

lifs-tools/rmzTab-m documentation built on Jan. 26, 2023, 4:45 p.m.