downMicroGEODatasets: Download GEO datasets from Gene Expression Omnibus databse

In lihuamei/Biotools: Bioinformatics tools for data analysis.

Description

Download a list of microarray GEO datasets from Gene Expression Omnibus databse.

Usage

downMicroGEODatasets(geoIDs, log2Trans = FALSE, verbose = TRUE)

Arguments

geoIDs	A vector of GSE accession number for microarray datasets downloading.
log2Trans	log2(X + 1) transfer for the expression data, default: FALSE.
verbose	Show running infos or not, default: TRUE.

Value

A list of downloaded gene expression profiles of each GSE accession number.

Examples

exprsList <- downMicroGEODatasets(geoIDs = c('GSE19830'), log2Trans = FALSE)

lihuamei/Biotools documentation built on July 15, 2020, 1:50 a.m.