aln_xy: alignment function

Description Usage Arguments Value

View source: R/functions_alignments.R

Description

alignment function

Usage

1
aln_xy(x, y, substitution_matrix = "BLOSUM80", simulation = FALSE)

Arguments

x

a vector of query sequences

y

a vector of target sequences

substitution_matrix

a method used for alignment

simulation

a logical variable indicating whether want to simulation

Value

a list of alignment result


lijing28101/fagin2 documentation built on Jan. 8, 2022, 3:15 a.m.