Extract_logL: Calculates the loglikelihood for a list of MGLM objects.
In liudoubletian/phyloMDA: An R package for phylogeny-aware microbiome data analysis
Extract_logL R Documentation
Calculates the loglikelihood for a list of MGLM objects.
Description
This function extracts loglikelihood from a list of MGLM objects.
Usage
Extract_logL(x)
Arguments
x
A list of MGLM objects. 'MGLMdtmFit', 'MGLMdtmReg', 'MGLMdtmSparseReg', or 'MGLMdtmTune'.
Value
Returns the loglikelihood of a MGLMdtm object (a list of MGLM objects).
Examples
library(phyloseq)
otu.tab <- t(otu_table(combo.phyloseq.obj))
tree <- phy_tree(combo.phyloseq.obj)
fit <- MGLMdtmFit(otu.tab, tree)
Extract_logL(fit)
liudoubletian/phyloMDA documentation built on April 28, 2022, 6:51 p.m.
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| Extract_logL | R Documentation |
Calculates the loglikelihood for a list of MGLM objects.
Description
This function extracts loglikelihood from a list of MGLM objects.
Usage
Extract_logL(x)
Arguments
x |
A list of MGLM objects. 'MGLMdtmFit', 'MGLMdtmReg', 'MGLMdtmSparseReg', or 'MGLMdtmTune'. |
Value
Returns the loglikelihood of a MGLMdtm object (a list of MGLM objects).
Examples
library(phyloseq) otu.tab <- t(otu_table(combo.phyloseq.obj)) tree <- phy_tree(combo.phyloseq.obj) fit <- MGLMdtmFit(otu.tab, tree) Extract_logL(fit)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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