liupeng2117/MethylSeqDesign: MethylSeqDesign: a power calucation and study design tool for Methyl-Seq

MethylSeqDesign is a tool for Methyl-Seq power calculation and study design analysis. It controls FDR and calculates power at a genome-wide scale, both sample size (N) and sequencing depth (R) are considered. it takes into account the genome-wide variation of effect size and dispersion by utilizing a pilot data. This tool can calculates genome-wide power(i.e. expected discovery rate(EDR)) given a pilot data, and help you find the optimal N and R combinations for a given budget or a target EDR level.

install.packages("remotes")
remotes::install_github("liupeng2117/MethylSeqDesign")