liupeng2117/MethylSeqDesign: MethylSeqDesign: a power calucation and study design tool for Methyl-Seq

MethylSeqDesign is a tool for Methyl-Seq power calculation and study design analysis. It controls FDR and calculates power at a genome-wide scale, both sample size (N) and sequencing depth (R) are considered. it takes into account the genome-wide variation of effect size and dispersion by utilizing a pilot data. This tool can calculates genome-wide power(i.e. expected discovery rate(EDR)) given a pilot data, and help you find the optimal N and R combinations for a given budget or a target EDR level.

Getting started

Package details

Maintainer
LicenseGPL-3
Version0.0.0.9000
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("liupeng2117/MethylSeqDesign")
liupeng2117/MethylSeqDesign documentation built on May 29, 2019, 3:42 a.m.