PlotPattern: Plot patterns
In liuqivandy/SpaGene: Identify spatially localized genes and colocalized gene pairs
PlotPattern R Documentation
Plot patterns
Description
plot patterns from spatially variable genes
Usage
PlotPattern(pattern, location, max.cutoff = 0.9, pt.size = 2, alpha.min = 0.1)
Arguments
pattern
pattern result from FindPattern
location
location matrix
max.cutoff
the maximum value cutoff (default:0.9)
pt.size
the point size (default:2)
alpha.min
the alpha value of the minimum value (default:0.1)
Value
a list of ggplot
liuqivandy/SpaGene documentation built on July 1, 2023, 6:44 a.m.
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| PlotPattern | R Documentation |
Plot patterns
Description
plot patterns from spatially variable genes
Usage
PlotPattern(pattern, location, max.cutoff = 0.9, pt.size = 2, alpha.min = 0.1)
Arguments
pattern |
pattern result from FindPattern |
location |
location matrix |
max.cutoff |
the maximum value cutoff (default:0.9) |
pt.size |
the point size (default:2) |
alpha.min |
the alpha value of the minimum value (default:0.1) |
Value
a list of ggplot
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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