PlotPattern_Multi: Plot patterns across multiple samples

View source: R/SpaGene.R

PlotPattern_MultiR Documentation

Plot patterns across multiple samples

Description

plot patterns from spatially variable genes from multiple samples

Usage

PlotPattern_Multi(
  pattern,
  locationlist,
  patternid = 1,
  max.cutoff = 0.9,
  pt.size = 2,
  alpha.min = 0.1
)

Arguments

pattern

pattern result from FindPattern_Multi

max.cutoff

the maximum value cutoff (default:0.9)

pt.size

the point size (default:2)

alpha.min

the alpha value of the minimum value (default:0.1)

location

a list of location matrix

Value

a list of ggplot


liuqivandy/SpaGene documentation built on July 1, 2023, 6:44 a.m.