read_fasta: Tools for reading fasta files to R environment.
In lizandropf/ncbiRtools: Tools for searching and retrieving data from NCBI sequence databases
Description
Usage
Arguments
Details
Author(s)
References
See Also
Examples
Description
This function reads fasta files from disk or those retrieve by
fetchseq (within function).
Usage
1
read_fasta(idfile)
Arguments
idfile
file path of fasta file.
Details
It reads fasta files to disk. It is also used internally for function
fetchseq to read retrieved fasta files from GenBank.
Author(s)
L.N. Peraza-Flores
References
For details on database visit:
https://ncbi.nlm.nih.gov
See Also
searchGB, fetchseq, read_gb, read_PubMedRec, write2fas
Examples
1
# load example data:
lizandropf/ncbiRtools documentation built on May 14, 2019, 8:02 a.m.
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Description Usage Arguments Details Author(s) References See Also Examples
Description
This function reads fasta files from disk or those retrieve by
fetchseq (within function).
Usage
1 | read_fasta(idfile)
|
Arguments
idfile |
file path of fasta file. |
Details
It reads fasta files to disk. It is also used internally for function
fetchseq to read retrieved fasta files from GenBank.
Author(s)
L.N. Peraza-Flores
References
For details on database visit: https://ncbi.nlm.nih.gov
See Also
searchGB, fetchseq, read_gb, read_PubMedRec, write2fas
Examples
1 | # load example data:
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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