gap_removal: gap_removal function

In lloydlow/EntropyCorrect: Entropy correction of a Multiple Sequence Alignment (MSA) sample

Description

This function is one of the functions that makes EntropyMSA works.

Usage

gap_removal(MSA2, gap)

Arguments

MSA2	The input is a multiple sequence alignment in FASTA format.
gap	This is for gap removal in an alignment column. The default accepts 100 percentage of gaps. Users can change the numeric value provided to this parameter from 0 to 1 to change the gaps that can be tolerated per alignment column. 0 for 0 percentage gaps, 1 for 100 percentage gaps.

Examples

#see EntropyMSA function

lloydlow/EntropyCorrect documentation built on May 21, 2019, 7:34 a.m.