removeDup: Remove duplicated rows and columns

In llrs/BioCor: Functional similarities

Remove duplicated rows and columns

Description

Given the indices of the duplicated entries remove the columns and rows until just one is left, it keeps the duplicated with the highest absolute mean value.

Usage

removeDup(cor_mat, dupli)

Arguments

cor_mat	List of matrices
dupli	List of indices with duplicated entries

Value

A matrix with only one of the columns and rows duplicated

Author(s)

Lluís Revilla

See Also

duplicateIndices() to obtain the list of indices with duplicated entries.

Examples

a <- seq2mat(c("52", "52", "53", "55"), runif(choose(4, 2)))
b <- seq2mat(c("52", "52", "53", "55"), runif(choose(4, 2)))
mat <- list("kegg" = a, "react" = b)
mat
dupli <- duplicateIndices(rownames(a))
remat <- removeDup(mat, dupli)
remat

llrs/BioCor documentation built on April 24, 2024, 5:50 p.m.