filterMultiSources: Filter multisource contamination
In lpwgit/contPredict: contPredict R Package
Description
Usage
Arguments
Value
References
Description
This function filter multisource contamination
Usage
1
filterMultiSources(filename,output_path,VAFdata,VAFcov,uniq_both)
Arguments
filename
character, contamination file name
output_path
character, output directory
VAFdata
data frame, mutation VAF
VAFcov
data frame, mutation coverage
uniq_both
integer, flag to control type of overlapping mutation in source and target samples
Value
write contPredict.txt to output_path
References
TBA
lpwgit/contPredict documentation built on May 7, 2019, 10:52 p.m.
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Description Usage Arguments Value References
Description
This function filter multisource contamination
Usage
1 | filterMultiSources(filename,output_path,VAFdata,VAFcov,uniq_both)
|
Arguments
filename |
character, contamination file name |
output_path |
character, output directory |
VAFdata |
data frame, mutation VAF |
VAFcov |
data frame, mutation coverage |
uniq_both |
integer, flag to control type of overlapping mutation in source and target samples |
Value
write contPredict.txt to output_path
References
TBA
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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