View source: R/Data_handling.R
structure_eddy | R Documentation |
Folder structure recommended for eddy covariance data processing and archivation.
structure_eddy(root = ".", create_dirs = FALSE, fsep = .Platform$file.sep, ...)
root |
A character string defining the root of created folder structure. |
create_dirs |
A logical value. Indicates whether directories should be created. |
fsep |
A character. The path separator to use (assumed to be ASCII). |
... |
Further arguments to be passed to |
The purpose is to standardize the locations for metadata and post-processing inputs required to run the proposed workflow (https://github.com/lsigut/EC_workflow) as well as to store data and metadata in levels corresponding to processing stage. The folder structure is not required to successfully apply the workflow but simplifies its use.
Data processing stages
Level 0: Raw files with measured high frequency eddy covariance data and relevant metadata or instrument setup files.
Level 1: Processing software setup and output files and a logbook.
Level 2: Quality checking results and documentation, definition of ecosystem boundary, storage flux processing and files used as inputs for Level 3 data.
Level 3: gap-filling output and its documentation, summary of the computed fluxes and meteorological data including their aggregation.
A named list with paths to folder structure directories.
Corresponding directories are created as a function side effect if
create_dirs = TRUE
.
file.path
xx <- structure_eddy()
xx
xx$Input_for_GF
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.