Files in luciorq/txomics

Functional Analysis and Visualization of Transcriptomic Data

.Rbuildignore

.gitignore

.travis.yml

CODE_OF_CONDUCT.md

DESCRIPTION

LICENSE

LICENSE.md

NAMESPACE

NEWS.md R/functions.R README.Rmd README.md

_pkgdown.yml

appveyor.yml

codecov.yml

cran-comments.md

docs/CODE_OF_CONDUCT.html

docs/LICENSE-text.html

docs/LICENSE.html

docs/articles/index.html

docs/articles/using_txomics.html

docs/articles/using_txomics_files/figure-html/plot-heatmap-1.png

docs/articles/using_txomics_files/figure-html/plot-pca-1.png

docs/articles/using_txomics_files/figure-html/plot-volcano-1.png

docs/articles/using_txomics_files/figure-html/unnamed-chunk-7-1.png

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/logo.png

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/calc_var_by_row.html

docs/reference/de_analysis.html

docs/reference/draw_colnames_45.html

docs/reference/figures/logo.png

docs/reference/figures/txomics_logo.svg

docs/reference/filter_tx.html

docs/reference/gsea_analysis.html

docs/reference/import_tx.html

docs/reference/index.html

docs/reference/le_analysis.html

docs/reference/multiplot.html

docs/reference/pipe.html

docs/reference/plot_deg_heatmap.html

docs/reference/plot_gene_expression.html

docs/reference/plot_gsea.html

docs/reference/plot_gsea_heatmap.html

docs/reference/plot_gsea_res.html

docs/reference/plot_heatmap.html

docs/reference/plot_le_heatmap.html

docs/reference/plot_pca.html

docs/reference/plot_venn_diagram.html

docs/reference/plot_volcano.html

docs/reference/prepare_tx_mat.html

docs/reference/retrieve_deg.html

docs/reference/retrieve_deg_table.html

docs/reference/retrieve_le_table.html

docs/reference/retrieve_mapping_rate.html

docs/reference/retrieve_metadata_sra.html

docs/reference/salmon_libtype.html

docs/reference/txomics-package.html

man/calc_var_by_row.Rd man/de_analysis.Rd man/draw_colnames_45.Rd

man/figures/logo.png

man/figures/txomics_logo.svg

man/filter_tx.Rd man/gsea_analysis.Rd man/import_tx.Rd man/le_analysis.Rd man/multiplot.Rd man/pipe.Rd man/plot_deg_heatmap.Rd man/plot_gene_expression.Rd man/plot_gsea.Rd man/plot_gsea_heatmap.Rd man/plot_gsea_res.Rd man/plot_heatmap.Rd man/plot_le_heatmap.Rd man/plot_pca.Rd man/plot_venn_diagram.Rd man/plot_volcano.Rd man/prepare_tx_mat.Rd man/retrieve_deg.Rd man/retrieve_deg_table.Rd man/retrieve_le_table.Rd man/retrieve_mapping_rate.Rd man/retrieve_metadata_sra.Rd man/salmon_libtype.Rd man/txomics-package.Rd tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test-import_tx.R tests/testthat/test-plot_heatmap.R tests/testthat/test-plot_pca.R tests/testthat/test-plot_venn_diagram.R tests/testthat/test-plot_volcano.R

txomics.Rproj

vignettes/.gitignore

vignettes/using_txomics.Rmd

luciorq/txomics documentation built on Sept. 3, 2020, 5:36 a.m.