plot_negCtrl: Assess negative control wells
In lucyleeow/CellProfileR: Analyse Cell Morphology Data Generated By CellProfiler

Assesses the variance of a given feature in the negative control wells of each plate.

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plot_negCtrl(df, feature, annot_col, neg_ctrl)

calc_negCtrl(df, feature, annot_col, neg_ctrl)

`df`	Dataframe of Cell Profiler data including well annotations.
`feature`	Name of the feature column to plot as string.
`annot_col`	Name of the column containing the negative control terms as string.
`neg_ctrl`	The term labelling the negative control wells in the annotation (e.g. "DMSO"), as string.

plot_negCtrl: Create boxplot of the negative control wells for each plate for a given feature, in the current graphics device.
calc_negCtrl: Calculates the mean, standard deviation and coefficient of variation for the negative control wells for each plate given a feature and outputs the results as a dataframe.

lucyleeow/CellProfileR documentation built on May 21, 2019, 2:30 a.m.