plot_plateHeat: Plot plate heatmaps

In lucyleeow/CellProfileR: Analyse Cell Morphology Data Generated By CellProfiler

Description

Plot a feature (column) as a plate heatmap for each plate, in the current graphics device. Scale is uniform across all plates, such that the max value = red, min value = blue and median value = white.

Usage

plot_plateHeat(df_PW, column, plate = 384)

Arguments

df_PW	Dataframe of per well Cell Profiler data.
column	Name of the column (feature) to plot, as string. Matching for column name will be doing using grep but enough of the column name must be given to identify a single column in the dataframe.
plate	Number of wells in a plate.

lucyleeow/CellProfileR documentation built on May 21, 2019, 2:30 a.m.