Description Usage Arguments Value Examples
This function allows you to pull out the ChIP signal flanking the rDNA region on
chromosome 12. The function takes as input the wiggle data as a list of 16 chromosomes.
(output of readall_tab
).
1 | signal_at_rDNA(inputData, saveFile = FALSE)
|
inputData |
As a list of the 16 chr wiggle data (output of |
saveFile |
Boolean indicating whether output should be written to a .txt file (in current working
directory). If |
A local data frame with four columns:
chr
Chromosome number
position
Nucleotide coordinate (in normalized total length of 1 kb)
signal
ChIP-seq signal at each position (1 to 1000)
gene
Systematic gene name
1 2 3 4 5 6 | ## Not run:
signal_at_rDNA(WT)
signal_at_rDNA(WT, saveFile = TRUE)
## End(Not run)
|
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