Description Usage Arguments Value Author(s)
View source: R/start_analysis.R
This function executes EDec for the specified CpGs and the number of cell types K.
1 2 | start.edec.analysis(meth.data = NULL, rnb.set = NULL, cg_groups, Ks,
work.dir = getwd(), factorviz.outputs = FALSE)
|
meth.data |
A |
rnb.set |
An object of type |
cg_groups |
List of CpG indices used for the analysis. Can be computed by |
Ks |
The number of cell types to be tested. Can be a single numeric value or an array of numbers. |
work.dir |
The working directory to be used. |
factorviz.outputs |
Flag indicating, if outputs should be stored to be compatible with FactorViz for data exploration |
An object of type MeDeComSet
containing the results of the EDec experiment.
Michael Scherer
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