API for madhulika-EBI/Batchevaluation
Toolkit for batch correction
| Global functions | |
|---|---|
| %>% | Man page |
| BatchEntropy | Source code |
| ComBat_seq | Man page Source code |
| PVCA | Man page Source code |
| access_data | Source code |
| access_data.ExpressionSet | Source code |
| access_data.SummarizedExperiment | Source code |
| access_meta | Source code |
| access_meta.ExpressionSet | Source code |
| access_meta.SummarizedExperiment | Source code |
| access_pheno | Source code |
| access_pheno.ExpressionSet | Source code |
| access_pheno.SummarizedExperiment | Source code |
| batch_correction | Man page Source code |
| batch_correction.ExpressionSet | Source code |
| batch_correction.SummarizedExperiment | Source code |
| batch_evaluation.RNAseq | Man page Source code |
| batch_evaluation.microarray | Man page Source code |
| batch_sil | Man page Source code |
| bcm_ranking | Man page Source code |
| correlate.fun_gen | Source code |
| correlate.fun_two | Source code |
| detect_effect | Man page Source code |
| diagnostic_matrix.RNAseq | Man page Source code |
| diagnostic_matrix.microarray | Man page Source code |
| diagnostic_plot.RNAseq | Man page Source code |
| diagnostic_plot.microarray | Man page Source code |
| download_experiments_from_ExpressionAtlas | Man page Source code |
| expressed.data | Source code Source code |
| find_hvg | Source code |
| gfs | Source code |
| hvg_result_batches | Source code |
| hvg_result_corrected | Source code |
| load_experiments | Man page Source code |
| mapDisp | Source code |
| match_quantiles | Source code |
| merge_experiment.ExpressionSet | Man page Source code |
| merge_experiment.RNAseq | Man page |
| merge_experiment.SummarizedExperiment | Man page Source code |
| merge_experiments.ExpressionSet | Man page |
| microarray.data | Source code |
| monte_carlo_int_NB | Source code |
| pcRegression | Man page Source code |
| pca.data | Source code |
| remove_NA | Source code Source code |
| remove_isolated_experiments | Man page Source code |
| seq.data | Source code |
| transposed.exprs | Source code |
| vec2mat | Source code |
