CalculatePredictionAndTrueOnDirectInteraction: Pair up the direct interaction between different gene pairs...
In mahfuz05062/FLEX_R: FunctionaL Evaluation of eXperimental perturbation (i.e. genome wide knockout) screens
Description
Usage
Arguments
Value
View source: R/AssembleDataForPR.R
Description
Pair up the direct interaction between different gene pairs and their true co-annotation value
Usage
1
CalculatePredictionAndTrueOnDirectInteraction(data.standard, data.interaction)
Arguments
data.standard:
the functional standard (Symbol1, Symbol2, 1/0, source (optional))
data.interaction:
interaction scores (returned from GetInteractionData)
Value
A list of :
data: combined (query) interactions (score) and their corresponding co-annotation (true) (sorted from -ve to +ve)
Queries.with.AUC: The queries that has some AUC values (others are 0), sorted alphabetically
auc.neg: AUC value for the data (neg to pos), sorted according to queries
auc.pos: AUC value for the data (pos to neg), sorted according to queries
mahfuz05062/FLEX_R documentation built on May 27, 2021, 4:32 a.m.
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Description Usage Arguments Value
View source: R/AssembleDataForPR.R
Description
Pair up the direct interaction between different gene pairs and their true co-annotation value
Usage
1 | CalculatePredictionAndTrueOnDirectInteraction(data.standard, data.interaction)
|
Arguments
data.standard: |
the functional standard (Symbol1, Symbol2, 1/0, source (optional)) |
data.interaction: |
interaction scores (returned from GetInteractionData) |
Value
A list of : data: combined (query) interactions (score) and their corresponding co-annotation (true) (sorted from -ve to +ve) Queries.with.AUC: The queries that has some AUC values (others are 0), sorted alphabetically auc.neg: AUC value for the data (neg to pos), sorted according to queries auc.pos: AUC value for the data (pos to neg), sorted according to queries
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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