GetContributionOfEntitiesAtCertainTP: Separate the contribution of signal into individual entries...
In mahfuz05062/FLEX_R: FunctionaL Evaluation of eXperimental perturbation (i.e. genome wide knockout) screens
Description
Usage
Arguments
Value
Description
Separate the contribution of signal into individual entries (a complex, pathway, GO Biological Process etc.)
Works on the result of CalculatePredictionAndTrueOnLibraryProfiles
Usage
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GetContributionOfEntitiesAtCertainTP(
entity.matrix,
top.number,
summary.standard,
data.standard
)
Arguments
entity.matrix
-> True, Predicted values with pair association to an entity
summary.standard
-> Identity of each entity ('ID'), 'Name', Genes insdie ('Gene'), 'Length'
data.standard
-> Co annotation standard (gene1, gene2, 1/0, source)
top.numbers
-> How much of the signal to consider (from the top)
Value
The entities and their contribution to the signal, also the top top.number of TPs
mahfuz05062/FLEX_R documentation built on May 27, 2021, 4:32 a.m.
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Description Usage Arguments Value
Description
Separate the contribution of signal into individual entries (a complex, pathway, GO Biological Process etc.) Works on the result of CalculatePredictionAndTrueOnLibraryProfiles
Usage
1 2 3 4 5 6 | GetContributionOfEntitiesAtCertainTP(
entity.matrix,
top.number,
summary.standard,
data.standard
)
|
Arguments
entity.matrix |
-> True, Predicted values with pair association to an entity |
summary.standard |
-> Identity of each entity ('ID'), 'Name', Genes insdie ('Gene'), 'Length' |
data.standard |
-> Co annotation standard (gene1, gene2, 1/0, source) |
top.numbers |
-> How much of the signal to consider (from the top) |
Value
The entities and their contribution to the signal, also the top top.number of TPs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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