kidneyTabulaMuris: A subset of the Tabula Muris SmartSeq2 data, restricted to...

Description Usage Format References

Description

A subset of the Tabula Muris data with 215 cells and 23341 genes. There are three cell types, endothelial cells: 122 cells, kidney collecting duct epithelial cell: 78 cells and leukoocytes 15 cells.

Usage

1

Format

A list with two components:

exp

Gene expression sparse matrix of class dgCMatrix, with normalized log expression values. Rows are genes, columns are cells.

cellType

A character vector containing the cell types.

References

The Tabula Muris Consortium Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature, 562:7727, 2018


mahmoudibrahim/genesorteR documentation built on April 20, 2021, 4:07 p.m.