makeUCSCsession: Initiate UCSC genome browser session given the freeze...
In malnirav/hiAnnotator: Functions for annotating GRanges objects
Description
Usage
Arguments
Value
See Also
Examples
Description
Initiate UCSC genome browser session given the freeze argument.
Usage
1
makeUCSCsession(freeze = "hg19")
Arguments
freeze
one of following: hg19, mm8, rheM, etc. Default is hg19.
Value
browser session object compatible with rtracklayer functions.
See Also
getUCSCtable, makeGRanges,
getNearestFeature, getSitesInFeature
Examples
1
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5
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7
## Not run:
session <- makeUCSCsession()
genome(session)
session <- makeUCSCsession("mm8")
genome(session)
## End(Not run)
malnirav/hiAnnotator documentation built on July 29, 2021, 6:32 a.m.
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Description Usage Arguments Value See Also Examples
Description
Initiate UCSC genome browser session given the freeze argument.
Usage
1 | makeUCSCsession(freeze = "hg19")
|
Arguments
freeze |
one of following: hg19, mm8, rheM, etc. Default is hg19. |
Value
browser session object compatible with rtracklayer functions.
See Also
getUCSCtable, makeGRanges,
getNearestFeature, getSitesInFeature
Examples
1 2 3 4 5 6 7 | ## Not run:
session <- makeUCSCsession()
genome(session)
session <- makeUCSCsession("mm8")
genome(session)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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