rgl_static_plots_Description: Embedding the Static Plots

In mandymejia/ciftiTools: Tools for Reading, Writing, Viewing and Manipulating CIFTI Files

Embedding the Static Plots

Description

Embedding the Static Plots

Embedding the Static Plots

To embed a static plot in an R Markdown document, first execute rgl::setupKnitr() to prepare the document for embedding the snapshot of the Open GL window. Then execute the plot command as you normally would to create an Open GL window (i.e. without specifying fname, and by requesting only one idx). In the options for the chunk in which the plot command is executed, set rgl=TRUE, format="png". You can also control the image dimensions here e.g. fig.height=3.8, fig.width=5. When the R Markdown document is knitted, the static plots should be displayed below the chunk in which the plot command was executed. See the vignette for an example.

mandymejia/ciftiTools documentation built on Feb. 28, 2024, 11:20 a.m.