Files in manschmi/RMetaTools
Tools For Metagene Analysis
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/RMetaTools.R
R/computeMatrix.R
R/deeptools_funs.R
R/metagene.R
R/quantile_match.R
R/rtracklayer.R
RMetaTools.Rproj
inst/.DS_Store
inst/extdata/Chen_PROMPT_TSSs_liftedTohg38.bed
inst/extdata/Chen_PROMPT_TSSs_liftedTohg38_minus.bed
inst/extdata/Chen_PROMPT_TSSs_liftedTohg38_plus.bed
inst/extdata/GSM1573839_mNET_8WG16_siCPSF73_minus_hg38.bw
inst/extdata/GSM1573839_mNET_8WG16_siCPSF73_plus_hg38.bw
inst/extdata/GSM1573841_mNET_8WG16_siLuc_minus_hg38.bw
inst/extdata/GSM1573841_mNET_8WG16_siLuc_plus_hg38.bw
inst/extdata/deeptools3_matrix.gz
inst/extdata/matrix.gz
inst/extdata/matrix_grouped.gz
inst/extdata/snRNA_MS31_hg38.bed
man/RMetaTools.Rd
man/collapse_to_n_windows.Rd
man/collapse_to_window_size.Rd
man/create_bw_file_set.Rd
man/get_matrix.Rd
man/get_region_for_gene.Rd
man/get_single_strand_matrix.Rd
man/load_bw_set.Rd
man/load_deeptoolsmatrix.Rd
man/load_deeptoolsmatrix3.Rd
man/load_deeptoolsmatrix3_new.Rd
man/mat_to_tbl.Rd
man/match_quantiles.Rd
man/meta_average.Rd
man/meta_regions.Rd
man/metagene_aggregate.Rd
man/metagene_matrix.Rd
man/metagene_ratio.Rd
man/metagene_rel_anchor.Rd
man/modify.metagene.Rd
man/parse_matrix_header.Rd
man/plot_heatmap.Rd
man/plot_htmp.Rd
man/plot_profile.Rd
man/sort_matrix.Rd
man/to_tibble.Rd
scripts/metageneR.R
scripts/test.RData
scripts/test_metageneR.txt
vignettes/.gitignore
vignettes/benchmark_bigwig_import.Rmd
vignettes/benchmark_deeptools_vs_metageneInR.Rmd
vignettes/benchmark_load_deeptoolsmatrix3.Rmd
vignettes/metagene_vignette.Rmd
