dataStandardize: Data standardization

Description Usage Arguments Value

Description

Standardize FPKM input by log10-transformation followed by central scaled according to gene expression average and sd in the training data. Missing expression values are randomly imputated based on the training data average and sd.

Usage

1
dataStandardize(fpkm, standardize = TRUE)

Arguments

fpkm

A matrix of gene expression represented as FPKM. Each row represent one gene (named by EnsemblID) and each column represent one sample

Value

A matrix of standardized FPKM


maplesword/neuMatIdx documentation built on May 31, 2019, 1:16 p.m.