tpmToFpkm: Convert TPM to FPKM

Description Usage Arguments Value

Description

Convert TPM to FPKM based on the given gene length. This is useful when gene expression in neurons are represented as TPM, e.g. when quantifying with RSEM.

Usage

1
tpmToFpkm(tpm, geneLength)

Arguments

tpm

A matrix of gene expression represented as TPM. Each row represent one gene and each column represent one sample

geneLength

A vector with the same length as the row number of tpm matrix, representing length of genes in bp

Value

A matrix of FPKM


maplesword/neuMatIdx documentation built on May 31, 2019, 1:16 p.m.