labelAttractors: Label attractor.

In mar-esther23/boolnet-perturb: Perturb Boolean Networks

Description

Returns a list of labels for a the involved states in a BoolNet attractor object using a set of labelling rules, returns a list of labels.

Usage

labelAttractors(attr, label.rules, node.names = NULL, sep = "/")

Arguments

attr	Boolnet attractor object
label.rules	dataframe with labels (1st col) and rules (2nd col), if more than one rule is true all labels are appendedl the node names present in the rules must be in node.names
sep	string to separate the labels when more than one can be applied to the state, if NULL it will return the label of each state in a cycle separately if string it will paste the states of a cycle with sep

Value

List of strings corresponding to the label of the attractor, if an attractor has multiple states it will return a list of strings for that state.

See Also

labelState which this function wraps

Examples

attr <- getAttractors(net$genes)
labelAttractors(attr, net$genes, labels, rules, sep='')

mar-esther23/boolnet-perturb documentation built on April 21, 2020, 9:11 a.m.